PsiCLASS is a reference-based transcriptome assembler for single or multiple RNA-seq samples. Unlike conventional methods … See more The primary input to PsiCLASS is a set of BAM alignment files, one for each RNA-seq sample in the analysis. The program calculates a set of subexon files and a set of splice (intron) files, for the individual samples. (Optionally, … See more Alignment compatibility. PsiCLASS has been tuned to run on alignments generated with the tools HISAT and STAR. When running … See more The directory './example' in this distribution contains two BAM files, along with an example of a BAM list file. Run PsiCLASS with: or The run will generate the files 'psiclass_sample_0.gtf' … See more WebIf the superclasses are not searched, the method returns multiple results only in case of a syntax error (duplicate method). Parameters: patternMethod- the method used as a …
PsiElementFactory (Unofficial IntelliJ Community Edition API docs)
WebDescription. PsiCLASS is a reference-based transcriptome assembler for single or multiple RNA-seq samples. Unlike conventional methods that analyze each sample separately and then merge the outcomes to create a unified set of meta-annotations, PsiCLASS takes a multi-sample approach, simultaneously analyzing all RNA-seq data sets in an experiment. WebgetSuperTypes in interface PsiClass Returns: the list of class types for the classes or interfaces. For the class with no explicit extends list, the returned list always contains at least one element for the java.lang.Object type. If psiClass is java.lang.Object, returned list is empty. getContainingClass public PsiClass getContainingClass() grove boxhower funeral home
持有PsiFile实例,怎么获得PsiClass实例? - JetBrains
WebApr 7, 2024 · PSI Cookbook. . Edit page. Last modified: 07 April 2024. This page gives recipes for the most common operations for working with the PSI (Program Structure Interface). Unlike Developing Custom Language Plugins, it is about working with the PSI of existing languages (such as Java). See also the PSI Performance section. WebFeb 11, 2024 · 1. IntelliJ does mostly static analysis on your code. In fact, the IDE and the projects you run/debug have completely different classpaths. When you open a project, your dependencies are not added to the IDE classpath. Instead, the IDE will index the JARs, meaning it will automatically discover all the declarations (classes, methods, interfaces ... grove boxhowers greencastle pa obituaries